From 6b933047f46efec1aa747570f945344254227457 Mon Sep 17 00:00:00 2001 From: V3n3RiX Date: Fri, 15 Dec 2017 17:25:28 +0000 Subject: gentoo resync : 15.12.2017 --- metadata/md5-cache/sci-chemistry/Manifest.gz | Bin 28740 -> 28728 bytes metadata/md5-cache/sci-chemistry/coot-0.8.2-r1 | 4 ++-- metadata/md5-cache/sci-chemistry/gromacs-2018_beta1 | 14 -------------- metadata/md5-cache/sci-chemistry/gromacs-2018_beta2 | 14 ++++++++++++++ metadata/md5-cache/sci-chemistry/molmol-2k_p2-r5 | 4 ++-- 5 files changed, 18 insertions(+), 18 deletions(-) delete mode 100644 metadata/md5-cache/sci-chemistry/gromacs-2018_beta1 create mode 100644 metadata/md5-cache/sci-chemistry/gromacs-2018_beta2 (limited to 'metadata/md5-cache/sci-chemistry') diff --git a/metadata/md5-cache/sci-chemistry/Manifest.gz b/metadata/md5-cache/sci-chemistry/Manifest.gz index 608b065478bd..a917355d6190 100644 Binary files a/metadata/md5-cache/sci-chemistry/Manifest.gz and b/metadata/md5-cache/sci-chemistry/Manifest.gz differ diff --git a/metadata/md5-cache/sci-chemistry/coot-0.8.2-r1 b/metadata/md5-cache/sci-chemistry/coot-0.8.2-r1 index 228342b5f73a..e8c5060b3aa5 100644 --- a/metadata/md5-cache/sci-chemistry/coot-0.8.2-r1 +++ b/metadata/md5-cache/sci-chemistry/coot-0.8.2-r1 @@ -9,6 +9,6 @@ LICENSE=GPL-3 RDEPEND=sci-libs/libccp4 sci-libs/clipper >=sci-libs/coot-data-2 >=sci-libs/gsl-1.3 sci-libs/fftw:2.1= sci-libs/mmdb:2 sci-libs/monomer-db sci-libs/ssm sci-chemistry/reduce sci-chemistry/probe gnome-base/libgnomecanvas gnome-base/librsvg:2 media-libs/libpng:0= media-libs/freeglut x11-libs/gtk+:2 x11-libs/goocanvas:0 x11-libs/gtkglext virtual/opengl =dev-scheme/guile-lib-0.1.6 dev-scheme/guile-www >=x11-libs/guile-gtk-2.1 python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-db/sqlite:3 dev-libs/boost:0=[python,python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-libs/glib:2 >=dev-libs/gmp-4.2.2-r2:0= dev-python/pygobject:2[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] dev-python/pygtk:2[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),-python_single_target_python3_6(-),python_single_target_python2_7(+)] >=net-misc/curl-7.19.6 net-dns/libidn sys-libs/readline:0= REQUIRED_USE=python_targets_python2_7 SLOT=0 -SRC_URI=http://www2.mrc-lmb.cam.ac.uk/Personal/pemsley/coot/source/releases/coot-0.8.2.tar.gz test? ( https://www2.mrc-lmb.cam.ac.uk/Personal/pemsley/coot/data/greg-data.tar.gz -> coot-0.8.2-greg-data.tar.gz ) +SRC_URI=http://www2.mrc-lmb.cam.ac.uk/Personal/pemsley/coot/source/releases/coot-0.8.2.tar.gz test? ( https://dev.gentoo.org/~jlec/distfiles/coot-0.8.2-greg-data.tar.gz ) _eclasses_=autotools dc412f38566b91012efd58b9c203e6c3 autotools-utils 5a4611dfba155b1659528663fad4cd5e desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 libtool 0081a71a261724730ec4c248494f044d ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e python-single-r1 317a2557b4d7319a7418225f65accf77 python-utils-r1 c9de01becf9df3f8c10aeec3dc693f5d toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 -_md5_=2b74cc623f0547672a5c896cb7d9b4f7 +_md5_=53a3142631832554af71f4dd9435e68a diff --git a/metadata/md5-cache/sci-chemistry/gromacs-2018_beta1 b/metadata/md5-cache/sci-chemistry/gromacs-2018_beta1 deleted file mode 100644 index d8b9d0225950..000000000000 --- a/metadata/md5-cache/sci-chemistry/gromacs-2018_beta1 +++ /dev/null @@ -1,14 +0,0 @@ -DEFINED_PHASES=compile configure install postinst prepare pretend test unpack -DEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) opencl? ( virtual/opencl ) fftw? ( sci-libs/fftw:3.0 ) hwloc? ( sys-apps/hwloc ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) virtual/pkgconfig doc? ( app-doc/doxygen dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) dev-util/ninja >=dev-util/cmake-3.7.2 -DESCRIPTION=The ultimate molecular dynamics simulation package -EAPI=6 -HOMEPAGE=http://www.gromacs.org/ -IUSE=X blas cuda +doc -double-precision +fftw +hwloc lapack mkl mpi +offensive opencl openmp +single-precision test +threads +tng cpu_flags_x86_sse2 cpu_flags_x86_sse4_1 cpu_flags_x86_fma4 cpu_flags_x86_avx cpu_flags_x86_avx2 -KEYWORDS=~alpha ~amd64 ~arm ~ppc64 ~sparc ~x86 ~amd64-linux ~x86-linux ~x64-macos ~x86-macos -LICENSE=LGPL-2.1 UoI-NCSA !mkl? ( !fftw? ( BSD ) !blas? ( BSD ) !lapack? ( BSD ) ) cuda? ( LGPL-3 ) threads? ( BSD ) -RDEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) opencl? ( virtual/opencl ) fftw? ( sci-libs/fftw:3.0 ) hwloc? ( sys-apps/hwloc ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) -REQUIRED_USE=|| ( single-precision double-precision ) cuda? ( single-precision ) cuda? ( !opencl ) mkl? ( !blas !fftw !lapack ) -SLOT=0/2018_beta1 -SRC_URI=ftp://ftp.gromacs.org/pub/gromacs/gromacs-2018-beta1.tar.gz test? ( http://gerrit.gromacs.org/download/regressiontests-2018-beta1.tar.gz ) -_eclasses_=bash-completion-r1 8e447753aaf658afa609fbf961d80ab7 cmake-utils 77a5a8d3308359caadcdd91688f20093 cuda 626969678b9c5735753d8a380c6f295b desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 readme.gentoo-r1 6f03e110529650f57fc7d1fb908b8986 toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 xdg-utils f2c8335407f0b935b0a96d4adf23ef25 -_md5_=82669d558935beb971ab267ace7aff33 diff --git a/metadata/md5-cache/sci-chemistry/gromacs-2018_beta2 b/metadata/md5-cache/sci-chemistry/gromacs-2018_beta2 new file mode 100644 index 000000000000..408976d9e613 --- /dev/null +++ b/metadata/md5-cache/sci-chemistry/gromacs-2018_beta2 @@ -0,0 +1,14 @@ +DEFINED_PHASES=compile configure install postinst prepare pretend test unpack +DEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) opencl? ( virtual/opencl ) fftw? ( sci-libs/fftw:3.0 ) hwloc? ( sys-apps/hwloc ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) virtual/pkgconfig doc? ( app-doc/doxygen dev-texlive/texlive-latex dev-texlive/texlive-latexextra media-gfx/imagemagick ) dev-util/ninja >=dev-util/cmake-3.7.2 +DESCRIPTION=The ultimate molecular dynamics simulation package +EAPI=6 +HOMEPAGE=http://www.gromacs.org/ +IUSE=X blas cuda +doc -double-precision +fftw +hwloc lapack mkl mpi +offensive opencl openmp +single-precision test +threads +tng cpu_flags_x86_sse2 cpu_flags_x86_sse4_1 cpu_flags_x86_fma4 cpu_flags_x86_avx cpu_flags_x86_avx2 +KEYWORDS=~alpha ~amd64 ~arm ~ppc64 ~sparc ~x86 ~amd64-linux ~x86-linux ~x64-macos ~x86-macos +LICENSE=LGPL-2.1 UoI-NCSA !mkl? ( !fftw? ( BSD ) !blas? ( BSD ) !lapack? ( BSD ) ) cuda? ( LGPL-3 ) threads? ( BSD ) +RDEPEND=X? ( x11-libs/libX11 x11-libs/libSM x11-libs/libICE ) blas? ( virtual/blas ) cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) opencl? ( virtual/opencl ) fftw? ( sci-libs/fftw:3.0 ) hwloc? ( sys-apps/hwloc ) lapack? ( virtual/lapack ) mkl? ( sci-libs/mkl ) mpi? ( virtual/mpi ) +REQUIRED_USE=|| ( single-precision double-precision ) cuda? ( single-precision ) cuda? ( !opencl ) mkl? ( !blas !fftw !lapack ) +SLOT=0/2018_beta2 +SRC_URI=ftp://ftp.gromacs.org/pub/gromacs/gromacs-2018-beta2.tar.gz test? ( http://gerrit.gromacs.org/download/regressiontests-2018-beta2.tar.gz ) +_eclasses_=bash-completion-r1 8e447753aaf658afa609fbf961d80ab7 cmake-utils 77a5a8d3308359caadcdd91688f20093 cuda 626969678b9c5735753d8a380c6f295b desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 flag-o-matic a6089a2a4027ae3da4a460dc87b21050 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e multiprocessing 6f5991c7101863d0b29df63990ad852e ninja-utils ebb2eaddc6331c4fa000b8eb8f6fe074 readme.gentoo-r1 6f03e110529650f57fc7d1fb908b8986 toolchain-funcs 185a06792159ca143528e7010368e8af versionator c80ccf29e90adea7c5cae94b42eb76d0 xdg-utils f2c8335407f0b935b0a96d4adf23ef25 +_md5_=19ce149cec8b7da6545d6175fa517c2f diff --git a/metadata/md5-cache/sci-chemistry/molmol-2k_p2-r5 b/metadata/md5-cache/sci-chemistry/molmol-2k_p2-r5 index 700113fcd599..d15d810e8437 100644 --- a/metadata/md5-cache/sci-chemistry/molmol-2k_p2-r5 +++ b/metadata/md5-cache/sci-chemistry/molmol-2k_p2-r5 @@ -3,10 +3,10 @@ DEPEND=|| ( ( media-libs/mesa x11-libs/libGLw ) media-libs/mesa[motif] ) media-l DESCRIPTION=Publication-quality molecular visualization package EAPI=5 HOMEPAGE=http://hugin.ethz.ch/wuthrich/software/molmol/index.html -KEYWORDS=~amd64 ppc ~x86 ~amd64-linux ~x86-linux +KEYWORDS=~amd64 ppc x86 ~amd64-linux ~x86-linux LICENSE=molmol RDEPEND=|| ( ( media-libs/mesa x11-libs/libGLw ) media-libs/mesa[motif] ) media-libs/libpng:0 media-libs/tiff:0 sys-libs/zlib virtual/glu virtual/jpeg:0 x11-libs/libXpm x11-libs/motif:0 x11-apps/xdpyinfo SLOT=0 SRC_URI=ftp://ftp.mol.biol.ethz.ch/software/MOLMOL/unix-gzip/molmol-2k.2.0-src.tar.gz ftp://ftp.mol.biol.ethz.ch/software/MOLMOL/unix-gzip/molmol-2k.2.0-doc.tar.gz https://dev.gentoo.org/~soap/distfiles/molmol-patches.tbz2 _eclasses_=desktop 2ccd1dd1dd7bfb8795eea024a4f91bb6 epatch 8233751dc5105a6ae8fcd86ce2bb0247 estack 43ddf5aaffa7a8d0482df54d25a66a1f eutils 97ce9decef1ff4b6c5be700283f67343 ltprune 2770eed66a9b8ef944714cd0e968182e multilib 97f470f374f2e94ccab04a2fb21d811e prefix e51c7882b7b721e54e684f7eb143cbfe toolchain-funcs 185a06792159ca143528e7010368e8af -_md5_=287ff6a87a8d4cce14cd4bfda3378bee +_md5_=b82cc66feeb75ccf6830244752433bff -- cgit v1.2.3