From 8376ef56580626e9c0f796d5b85b53a0a1c7d5f5 Mon Sep 17 00:00:00 2001 From: V3n3RiX Date: Sat, 14 Jul 2018 21:03:06 +0100 Subject: gentoo resync : 14.07.2018 --- dev-python/numpy/Manifest | 26 ++++ .../files/numpy-1.10.2-no-hardcode-blas.patch | 64 ++++++++ .../files/numpy-1.12.1-no-hardcode-blas.patch | 72 +++++++++ .../numpy/files/numpy-1.8.0-no-hardcode-blas.patch | 25 ++++ .../numpy/files/numpy-1.9.2-no-hardcode-blas.patch | 35 +++++ dev-python/numpy/metadata.xml | 23 +++ dev-python/numpy/numpy-1.10.4.ebuild | 152 +++++++++++++++++++ dev-python/numpy/numpy-1.13.3.ebuild | 165 +++++++++++++++++++++ dev-python/numpy/numpy-1.8.2.ebuild | 145 ++++++++++++++++++ dev-python/numpy/numpy-1.9.2.ebuild | 146 ++++++++++++++++++ dev-python/numpy/numpy-9999.ebuild | 132 +++++++++++++++++ 11 files changed, 985 insertions(+) create mode 100644 dev-python/numpy/Manifest create mode 100644 dev-python/numpy/files/numpy-1.10.2-no-hardcode-blas.patch create mode 100644 dev-python/numpy/files/numpy-1.12.1-no-hardcode-blas.patch create mode 100644 dev-python/numpy/files/numpy-1.8.0-no-hardcode-blas.patch create mode 100644 dev-python/numpy/files/numpy-1.9.2-no-hardcode-blas.patch create mode 100644 dev-python/numpy/metadata.xml create mode 100644 dev-python/numpy/numpy-1.10.4.ebuild create mode 100644 dev-python/numpy/numpy-1.13.3.ebuild create mode 100644 dev-python/numpy/numpy-1.8.2.ebuild create mode 100644 dev-python/numpy/numpy-1.9.2.ebuild create mode 100644 dev-python/numpy/numpy-9999.ebuild (limited to 'dev-python/numpy') diff --git a/dev-python/numpy/Manifest b/dev-python/numpy/Manifest new file mode 100644 index 000000000000..060d62c13ae0 --- /dev/null +++ b/dev-python/numpy/Manifest @@ -0,0 +1,26 @@ +AUX numpy-1.10.2-no-hardcode-blas.patch 3295 BLAKE2B 300b64a2867cb55fef23aff58069187c1c743740fff75442f56da9e817adc4a857a29dccf5c543ff4c63da5d5618a34fdc1f640b65d8f8f23dcaa96c6334baa2 SHA512 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b/numpy/distutils/system_info.py +@@ -306,26 +306,7 @@ def get_info(name, notfound_action=0): + 1 - display warning message + 2 - raise error + """ +- cl = {'atlas': atlas_info, # use lapack_opt or blas_opt instead +- 'atlas_threads': atlas_threads_info, # ditto +- 'atlas_blas': atlas_blas_info, +- 'atlas_blas_threads': atlas_blas_threads_info, +- 'lapack_atlas': lapack_atlas_info, # use lapack_opt instead +- 'lapack_atlas_threads': lapack_atlas_threads_info, # ditto +- 'atlas_3_10': atlas_3_10_info, # use lapack_opt or blas_opt instead +- 'atlas_3_10_threads': atlas_3_10_threads_info, # ditto +- 'atlas_3_10_blas': atlas_3_10_blas_info, +- 'atlas_3_10_blas_threads': atlas_3_10_blas_threads_info, +- 'lapack_atlas_3_10': lapack_atlas_3_10_info, # use lapack_opt instead +- 'lapack_atlas_3_10_threads': lapack_atlas_3_10_threads_info, # ditto +- 'mkl': mkl_info, +- # openblas which may or may not have embedded lapack +- 'openblas': openblas_info, # use blas_opt instead +- # openblas with embedded lapack +- 'openblas_lapack': openblas_lapack_info, # use blas_opt instead +- 'lapack_mkl': lapack_mkl_info, # use lapack_opt instead +- 'blas_mkl': blas_mkl_info, # use blas_opt instead +- 'x11': x11_info, ++ cl = {'x11': x11_info, + 'fft_opt': fft_opt_info, + 'fftw': fftw_info, + 'fftw2': fftw2_info, +@@ -1690,7 +1671,7 @@ class blas_info(system_info): + lib = self.has_cblas(info) + if lib is not None: + info['language'] = 'c' +- info['libraries'] = [lib] ++ info['libraries'] = lib + info['define_macros'] = [('HAVE_CBLAS', None)] + self.set_info(**info) + +@@ -1722,16 +1703,16 @@ class blas_info(system_info): + # check for cblas lib, and if not present check for blas lib. + try: + c.link_executable(obj, os.path.join(tmpdir, "a.out"), +- libraries=["cblas"], ++ libraries=info["libraries"], + library_dirs=info['library_dirs'], + extra_postargs=info.get('extra_link_args', [])) +- res = "cblas" ++ res = info["libraries"] + except distutils.ccompiler.LinkError: + c.link_executable(obj, os.path.join(tmpdir, "a.out"), + libraries=["blas"], + library_dirs=info['library_dirs'], + extra_postargs=info.get('extra_link_args', [])) +- res = "blas" ++ res = ["blas"] + except distutils.ccompiler.CompileError: + res = None + finally: diff --git a/dev-python/numpy/files/numpy-1.12.1-no-hardcode-blas.patch b/dev-python/numpy/files/numpy-1.12.1-no-hardcode-blas.patch new file mode 100644 index 000000000000..81d6084be3d8 --- /dev/null +++ b/dev-python/numpy/files/numpy-1.12.1-no-hardcode-blas.patch @@ -0,0 +1,72 @@ +--- numpy-1.11.1/numpy/distutils/system_info.py ++++ numpy-1.11.1/numpy/distutils/system_info.py +@@ -312,27 +312,7 @@ + 1 - display warning message + 2 - raise error + """ +- cl = {'atlas': atlas_info, # use lapack_opt or blas_opt instead +- 'atlas_threads': atlas_threads_info, # ditto +- 'atlas_blas': atlas_blas_info, +- 'atlas_blas_threads': atlas_blas_threads_info, +- 'lapack_atlas': lapack_atlas_info, # use lapack_opt instead +- 'lapack_atlas_threads': lapack_atlas_threads_info, # ditto +- 'atlas_3_10': atlas_3_10_info, # use lapack_opt or blas_opt instead +- 'atlas_3_10_threads': atlas_3_10_threads_info, # ditto +- 'atlas_3_10_blas': atlas_3_10_blas_info, +- 'atlas_3_10_blas_threads': atlas_3_10_blas_threads_info, +- 'lapack_atlas_3_10': lapack_atlas_3_10_info, # use lapack_opt instead +- 'lapack_atlas_3_10_threads': lapack_atlas_3_10_threads_info, # ditto +- 'mkl': mkl_info, +- # openblas which may or may not have embedded lapack +- 'openblas': openblas_info, # use blas_opt instead +- # openblas with embedded lapack +- 'openblas_lapack': openblas_lapack_info, # use blas_opt instead +- 'blis': blis_info, # use blas_opt instead +- 'lapack_mkl': lapack_mkl_info, # use lapack_opt instead +- 'blas_mkl': blas_mkl_info, # use blas_opt instead +- 'x11': x11_info, ++ cl = {'x11': x11_info, + 'fft_opt': fft_opt_info, + 'fftw': fftw_info, + 'fftw2': fftw2_info, +@@ -669,10 +650,7 @@ + return [b for b in [a.strip() for a in libs.split(',')] if b] + + def get_libraries(self, key='libraries'): +- if hasattr(self, '_lib_names'): +- return self.get_libs(key, default=self._lib_names) +- else: +- return self.get_libs(key, '') ++ return self.get_libs(key, '') + + def library_extensions(self): + static_exts = ['.a'] +@@ -1685,7 +1663,7 @@ + lib = self.has_cblas(info) + if lib is not None: + info['language'] = 'c' +- info['libraries'] = [lib] ++ info['libraries'] = lib + info['define_macros'] = [('HAVE_CBLAS', None)] + self.set_info(**info) + +@@ -1718,16 +1696,16 @@ + # check for cblas lib, and if not present check for blas lib. + try: + c.link_executable(obj, os.path.join(tmpdir, "a.out"), +- libraries=["cblas"], ++ libraries=info["libraries"], + library_dirs=info['library_dirs'], + extra_postargs=info.get('extra_link_args', [])) +- res = "cblas" ++ res = info["libraries"] + except distutils.ccompiler.LinkError: + c.link_executable(obj, os.path.join(tmpdir, "a.out"), + libraries=["blas"], + library_dirs=info['library_dirs'], + extra_postargs=info.get('extra_link_args', [])) +- res = "blas" ++ res = ["blas"] + except distutils.ccompiler.CompileError: + res = None + finally: diff --git a/dev-python/numpy/files/numpy-1.8.0-no-hardcode-blas.patch b/dev-python/numpy/files/numpy-1.8.0-no-hardcode-blas.patch new file mode 100644 index 000000000000..eaf30dd8e130 --- /dev/null +++ b/dev-python/numpy/files/numpy-1.8.0-no-hardcode-blas.patch @@ -0,0 +1,25 @@ +patch to allow any blas (c or f77) to simulate the +special treatment atlas libs have in numpy. +2013: numpy.distutils still horrendous code + +--- numpy/distutils/system_info.py.orig 2013-11-25 19:54:45.760217851 -0800 ++++ numpy/distutils/system_info.py 2013-11-25 20:00:26.575310888 -0800 +@@ -293,17 +293,7 @@ + 1 - display warning message + 2 - raise error + """ +- cl = {'atlas': atlas_info, # use lapack_opt or blas_opt instead +- 'atlas_threads': atlas_threads_info, # ditto +- 'atlas_blas': atlas_blas_info, +- 'atlas_blas_threads': atlas_blas_threads_info, +- 'lapack_atlas': lapack_atlas_info, # use lapack_opt instead +- 'lapack_atlas_threads': lapack_atlas_threads_info, # ditto +- 'mkl': mkl_info, +- 'openblas': openblas_info, # use blas_opt instead +- 'lapack_mkl': lapack_mkl_info, # use lapack_opt instead +- 'blas_mkl': blas_mkl_info, # use blas_opt instead +- 'x11': x11_info, ++ cl = {'x11': x11_info, + 'fft_opt': fft_opt_info, + 'fftw': fftw_info, + 'fftw2': fftw2_info, diff --git a/dev-python/numpy/files/numpy-1.9.2-no-hardcode-blas.patch b/dev-python/numpy/files/numpy-1.9.2-no-hardcode-blas.patch new file mode 100644 index 000000000000..674dbfadbf08 --- /dev/null +++ b/dev-python/numpy/files/numpy-1.9.2-no-hardcode-blas.patch @@ -0,0 +1,35 @@ + numpy/distutils/system_info.py | 21 +-------------------- + 1 file changed, 1 insertion(+), 20 deletions(-) + +diff --git a/numpy/distutils/system_info.py b/numpy/distutils/system_info.py +index a050430..d0878a5 100644 +--- a/numpy/distutils/system_info.py ++++ b/numpy/distutils/system_info.py +@@ -303,26 +303,7 @@ def get_info(name, notfound_action=0): + 1 - display warning message + 2 - raise error + """ +- cl = {'atlas': atlas_info, # use lapack_opt or blas_opt instead +- 'atlas_threads': atlas_threads_info, # ditto +- 'atlas_blas': atlas_blas_info, +- 'atlas_blas_threads': atlas_blas_threads_info, +- 'lapack_atlas': lapack_atlas_info, # use lapack_opt instead +- 'lapack_atlas_threads': lapack_atlas_threads_info, # ditto +- 'atlas_3_10': atlas_3_10_info, # use lapack_opt or blas_opt instead +- 'atlas_3_10_threads': atlas_3_10_threads_info, # ditto +- 'atlas_3_10_blas': atlas_3_10_blas_info, +- 'atlas_3_10_blas_threads': atlas_3_10_blas_threads_info, +- 'lapack_atlas_3_10': lapack_atlas_3_10_info, # use lapack_opt instead +- 'lapack_atlas_3_10_threads': lapack_atlas_3_10_threads_info, # ditto +- 'mkl': mkl_info, +- # openblas which may or may not have embedded lapack +- 'openblas': openblas_info, # use blas_opt instead +- # openblas with embedded lapack +- 'openblas_lapack': openblas_lapack_info, # use blas_opt instead +- 'lapack_mkl': lapack_mkl_info, # use lapack_opt instead +- 'blas_mkl': blas_mkl_info, # use blas_opt instead +- 'x11': x11_info, ++ cl = {'x11': x11_info, + 'fft_opt': fft_opt_info, + 'fftw': fftw_info, + 'fftw2': fftw2_info, diff --git a/dev-python/numpy/metadata.xml b/dev-python/numpy/metadata.xml new file mode 100644 index 000000000000..28902614586a --- /dev/null +++ b/dev-python/numpy/metadata.xml @@ -0,0 +1,23 @@ + + + + + sci@gentoo.org + Gentoo Science Project + + + python@gentoo.org + Python + + + NumPy is a general-purpose array-processing Python package designed to + efficiently manipulate large multi-dimensional arrays of arbitrary + records without sacrificing too much speed for small multi-dimensional + arrays. There are also basic facilities for discrete fourier transform, + basic linear algebra and random number generation. + It is the successor of Numeric and numarray. + + + numpy + + diff --git a/dev-python/numpy/numpy-1.10.4.ebuild b/dev-python/numpy/numpy-1.10.4.ebuild new file mode 100644 index 000000000000..44dbcb1a4e9e --- /dev/null +++ b/dev-python/numpy/numpy-1.10.4.ebuild @@ -0,0 +1,152 @@ +# Copyright 1999-2018 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 + +EAPI=5 + +PYTHON_COMPAT=( python2_7 python3_{4,5,6} ) +PYTHON_REQ_USE="threads(+)" + +FORTRAN_NEEDED=lapack + +inherit distutils-r1 eutils flag-o-matic fortran-2 multilib multiprocessing toolchain-funcs versionator + +DOC_PV="1.10.1" +DOC_P="${PN}-${DOC_PV}" + +DESCRIPTION="Fast array and numerical python library" +HOMEPAGE="https://www.numpy.org" +SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz + doc? ( + http://docs.scipy.org/doc/${DOC_P}/${PN}-html-${DOC_PV}.zip + http://docs.scipy.org/doc/${DOC_P}/${PN}-ref-${DOC_PV}.pdf + http://docs.scipy.org/doc/${DOC_P}/${PN}-user-${DOC_PV}.pdf + )" +# It appears the docs haven't been upgraded, still @ 1.8.1 +LICENSE="BSD" +SLOT="0" +KEYWORDS="alpha amd64 ~arm arm64 hppa ia64 ~mips ppc ppc64 ~s390 ~sh sparc x86 ~amd64-fbsd ~x86-fbsd ~amd64-linux ~arm-linux ~x86-linux ~ppc-macos ~x64-macos ~x86-macos ~sparc-solaris ~x64-solaris ~x86-solaris" +IUSE="doc lapack test" + +RDEPEND=" + dev-python/setuptools[${PYTHON_USEDEP}] + lapack? ( virtual/cblas virtual/lapack )" +DEPEND="${RDEPEND} + doc? ( app-arch/unzip ) + lapack? ( virtual/pkgconfig ) + test? ( >=dev-python/nose-1.0[${PYTHON_USEDEP}] )" + +# Uses distutils.command.config. +DISTUTILS_IN_SOURCE_BUILD=1 + +PATCHES=( + "${FILESDIR}"/${PN}-1.10.2-no-hardcode-blas.patch +) + +src_unpack() { + default + if use doc; then + unzip -qo "${DISTDIR}"/${PN}-html-${DOC_PV}.zip -d html || die + fi +} + +pc_incdir() { + $(tc-getPKG_CONFIG) --cflags-only-I $@ | \ + sed -e 's/^-I//' -e 's/[ ]*-I/:/g' -e 's/[ ]*$//' -e 's|^:||' +} + +pc_libdir() { + $(tc-getPKG_CONFIG) --libs-only-L $@ | \ + sed -e 's/^-L//' -e 's/[ ]*-L/:/g' -e 's/[ ]*$//' -e 's|^:||' +} + +pc_libs() { + $(tc-getPKG_CONFIG) --libs-only-l $@ | \ + sed -e 's/[ ]-l*\(pthread\|m\)\([ ]\|$\)//g' \ + -e 's/^-l//' -e 's/[ ]*-l/,/g' -e 's/[ ]*$//' \ + | tr ',' '\n' | sort -u | tr '\n' ',' | sed -e 's|,$||' +} + +python_prepare_all() { + if use lapack; then + append-ldflags "$($(tc-getPKG_CONFIG) --libs-only-other cblas lapack)" + local libdir="${EPREFIX}"/usr/$(get_libdir) + cat >> site.cfg <<-EOF + [blas] + include_dirs = $(pc_incdir cblas) + library_dirs = $(pc_libdir cblas blas):${libdir} + blas_libs = $(pc_libs cblas blas) + [lapack] + library_dirs = $(pc_libdir lapack):${libdir} + lapack_libs = $(pc_libs lapack) + EOF + else + export {ATLAS,PTATLAS,BLAS,LAPACK,MKL}=None + fi + + export CC="$(tc-getCC) ${CFLAGS}" + + append-flags -fno-strict-aliasing + + # See progress in http://projects.scipy.org/scipy/numpy/ticket/573 + # with the subtle difference that we don't want to break Darwin where + # -shared is not a valid linker argument + if [[ ${CHOST} != *-darwin* ]]; then + append-ldflags -shared + fi + + # only one fortran to link with: + # linking with cblas and lapack library will force + # autodetecting and linking to all available fortran compilers + append-fflags -fPIC + if use lapack; then + NUMPY_FCONFIG="config_fc --noopt --noarch" + # workaround bug 335908 + [[ $(tc-getFC) == *gfortran* ]] && NUMPY_FCONFIG+=" --fcompiler=gnu95" + fi + + # don't version f2py, we will handle it. + sed -i -e '/f2py_exe/s: + os\.path.*$::' numpy/f2py/setup.py || die + + # we don't have f2py-3.3 + sed \ + -e 's:test_f2py:_&:g' \ + -i numpy/tests/test_scripts.py || die + + distutils-r1_python_prepare_all + epatch_user +} + +python_compile() { + distutils-r1_python_compile \ + $(usex python_targets_python3_5 "" "-j $(makeopts_jobs)") \ + ${NUMPY_FCONFIG} +} + +python_test() { + distutils_install_for_testing ${NUMPY_FCONFIG} + + cd "${TMPDIR}" || die + ${EPYTHON} -c " +import numpy, sys +r = numpy.test(label='full', verbose=3) +sys.exit(0 if r.wasSuccessful() else 1)" || die "Tests fail with ${EPYTHON}" +} + +python_install() { + distutils-r1_python_install ${NUMPY_FCONFIG} +} + +python_install_all() { + DOCS+=( COMPATIBILITY DEV_README.txt THANKS.txt ) + + if use doc; then + HTML_DOCS=( "${WORKDIR}"/html/. ) + DOCS+=( "${DISTDIR}"/${PN}-{user,ref}-${DOC_PV}.pdf ) + fi + + distutils-r1_python_install_all + + docinto f2py + dodoc doc/f2py/*.txt + doman doc/f2py/f2py.1 +} diff --git a/dev-python/numpy/numpy-1.13.3.ebuild b/dev-python/numpy/numpy-1.13.3.ebuild new file mode 100644 index 000000000000..6303401c03f9 --- /dev/null +++ b/dev-python/numpy/numpy-1.13.3.ebuild @@ -0,0 +1,165 @@ +# Copyright 1999-2018 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 + +EAPI=6 + +PYTHON_COMPAT=( python2_7 python3_{4,5,6} ) +PYTHON_REQ_USE="threads(+)" + +FORTRAN_NEEDED=lapack + +inherit distutils-r1 flag-o-matic fortran-2 multiprocessing toolchain-funcs versionator + +DOC_PV="1.13.0" +DOC_P="${PN}-${DOC_PV}" + +DESCRIPTION="Fast array and numerical python library" +HOMEPAGE="https://www.numpy.org" +SRC_URI=" + mirror://pypi/${PN:0:1}/${PN}/${P}.zip + doc? ( + http://docs.scipy.org/doc/${DOC_P}/${PN}-html-${DOC_PV}.zip + http://docs.scipy.org/doc/${DOC_P}/${PN}-ref-${DOC_PV}.pdf + http://docs.scipy.org/doc/${DOC_P}/${PN}-user-${DOC_PV}.pdf + )" +# It appears the docs haven't been upgraded, still @ 1.11.0 +LICENSE="BSD" +SLOT="0" +KEYWORDS="~alpha ~amd64 ~arm ~arm64 ~hppa ~ia64 ~mips ~ppc ~ppc64 ~s390 ~sh ~sparc ~x86 ~amd64-fbsd ~x86-fbsd ~amd64-linux ~arm-linux ~x86-linux ~ppc-macos ~x64-macos ~x86-macos ~sparc-solaris ~x64-solaris ~x86-solaris" +IUSE="doc lapack test" + +RDEPEND="lapack? ( virtual/cblas virtual/lapack )" +DEPEND="${RDEPEND} + app-arch/unzip + dev-python/setuptools[${PYTHON_USEDEP}] + lapack? ( virtual/pkgconfig ) + test? ( >=dev-python/nose-1.0[${PYTHON_USEDEP}] )" + +PATCHES=( + "${FILESDIR}"/${PN}-1.12.1-no-hardcode-blas.patch +) + +src_unpack() { + default + if use doc; then + unzip -qo "${DISTDIR}"/${PN}-html-${DOC_PV}.zip -d html || die + fi +} + +pc_incdir() { + $(tc-getPKG_CONFIG) --cflags-only-I $@ | \ + sed -e 's/^-I//' -e 's/[ ]*-I/:/g' -e 's/[ ]*$//' -e 's|^:||' +} + +pc_libdir() { + $(tc-getPKG_CONFIG) --libs-only-L $@ | \ + sed -e 's/^-L//' -e 's/[ ]*-L/:/g' -e 's/[ ]*$//' -e 's|^:||' +} + +pc_libs() { + $(tc-getPKG_CONFIG) --libs-only-l $@ | \ + sed -e 's/[ ]-l*\(pthread\|m\)\([ ]\|$\)//g' \ + -e 's/^-l//' -e 's/[ ]*-l/,/g' -e 's/[ ]*$//' \ + | tr ',' '\n' | sort -u | tr '\n' ',' | sed -e 's|,$||' +} + +python_prepare_all() { + if use lapack; then + append-ldflags "$($(tc-getPKG_CONFIG) --libs-only-other cblas lapack)" + local libdir="${EPREFIX}"/usr/$(get_libdir) + cat >> site.cfg <<-EOF || die + [blas] + include_dirs = $(pc_incdir cblas) + library_dirs = $(pc_libdir cblas blas):${libdir} + blas_libs = $(pc_libs cblas blas) + [lapack] + library_dirs = $(pc_libdir lapack):${libdir} + lapack_libs = $(pc_libs lapack) + EOF + else + export {ATLAS,PTATLAS,BLAS,LAPACK,MKL}=None + fi + + export CC="$(tc-getCC) ${CFLAGS}" + + append-flags -fno-strict-aliasing + + # See progress in http://projects.scipy.org/scipy/numpy/ticket/573 + # with the subtle difference that we don't want to break Darwin where + # -shared is not a valid linker argument + if [[ ${CHOST} != *-darwin* ]]; then + append-ldflags -shared + fi + + # only one fortran to link with: + # linking with cblas and lapack library will force + # autodetecting and linking to all available fortran compilers + append-fflags -fPIC + if use lapack; then + NUMPY_FCONFIG="config_fc --noopt --noarch" + # workaround bug 335908 + [[ $(tc-getFC) == *gfortran* ]] && NUMPY_FCONFIG+=" --fcompiler=gnu95" + fi + + # don't version f2py, we will handle it. + sed -i -e '/f2py_exe/s: + os\.path.*$::' numpy/f2py/setup.py || die + + # we don't have f2py-3.3 + sed \ + -e 's:test_f2py:_&:g' \ + -i numpy/tests/test_scripts.py || die + + # QA bug 590464 + # The .py files from numpy/core/tests are just added, instead + # of being bytecode compiled as a proper subdir package. + # We trick the buildsystem into accepting it as a bytecode + # package by adding a setup.py and an empty __init__.py + #cp numpy/{compat/setup.py,core/tests} || die + #touch numpy/core/tests/__init__.py || die + #sed \ + # -e 's:compat:tests:' \ + # -i numpy/core/tests/setup.py || die + #sed \ + # -e "s:config\.add_data_dir('tests'):config\.add_subpackage('tests'):" \ + # -i numpy/core/setup.py || die + + distutils-r1_python_prepare_all +} + +python_compile() { + local python_makeopts_jobs="" + python_is_python3 || python_makeopts_jobs="-j $(makeopts_jobs)" + distutils-r1_python_compile \ + ${python_makeopts_jobs} \ + ${NUMPY_FCONFIG} +} + +python_test() { + distutils_install_for_testing --single-version-externally-managed --record "${TMPDIR}/record.txt" ${NUMPY_FCONFIG} + + cd "${TMPDIR}" || die + + ${EPYTHON} -c " +import numpy, sys +r = numpy.test(label='full', verbose=3) +sys.exit(0 if r.wasSuccessful() else 1)" || die "Tests fail with ${EPYTHON}" +} + +python_install() { + distutils-r1_python_install ${NUMPY_FCONFIG} +} + +python_install_all() { + DOCS+=( THANKS.txt ) + + if use doc; then + HTML_DOCS=( "${WORKDIR}"/html/. ) + DOCS+=( "${DISTDIR}"/${PN}-{user,ref}-${DOC_PV}.pdf ) + fi + + distutils-r1_python_install_all + + docinto f2py + dodoc doc/f2py/*.txt + doman doc/f2py/f2py.1 +} diff --git a/dev-python/numpy/numpy-1.8.2.ebuild b/dev-python/numpy/numpy-1.8.2.ebuild new file mode 100644 index 000000000000..418fa7468192 --- /dev/null +++ b/dev-python/numpy/numpy-1.8.2.ebuild @@ -0,0 +1,145 @@ +# Copyright 1999-2018 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 + +EAPI=5 + +PYTHON_COMPAT=( python{2_7,3_4} ) +PYTHON_REQ_USE="threads(+)" + +FORTRAN_NEEDED=lapack + +inherit distutils-r1 eutils flag-o-matic fortran-2 multilib toolchain-funcs versionator + +DOC_PV="1.8.1" +DOC_P="${PN}-${DOC_PV}" + +DESCRIPTION="Fast array and numerical python library" +HOMEPAGE="https://www.numpy.org" +SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz + doc? ( + http://docs.scipy.org/doc/${DOC_P}/${PN}-html-${DOC_PV}.zip + http://docs.scipy.org/doc/${DOC_P}/${PN}-ref-${DOC_PV}.pdf + http://docs.scipy.org/doc/${DOC_P}/${PN}-user-${DOC_PV}.pdf + )" +# It appears the docs haven't been upgraded, still @ 1.8.1 +LICENSE="BSD" +SLOT="0" +KEYWORDS="~alpha ~amd64 ~arm ~arm64 ~hppa ~ia64 ~mips ~ppc ~ppc64 ~s390 ~sh ~sparc ~x86 ~amd64-fbsd ~x86-fbsd ~amd64-linux ~arm-linux ~x86-linux ~ppc-macos ~x64-macos ~x86-macos ~sparc-solaris ~x64-solaris ~x86-solaris" +IUSE="doc lapack test" + +RDEPEND="dev-python/setuptools[${PYTHON_USEDEP}] + lapack? ( virtual/cblas virtual/lapack )" +DEPEND="${RDEPEND} + doc? ( app-arch/unzip ) + lapack? ( virtual/pkgconfig ) + test? ( dev-python/nose[${PYTHON_USEDEP}] )" + +# Uses distutils.command.config. +DISTUTILS_IN_SOURCE_BUILD=1 + +PATCHES=( + "${FILESDIR}"/${PN}-1.8.0-no-hardcode-blas.patch +) + +src_unpack() { + default + if use doc; then + unzip -qo "${DISTDIR}"/${PN}-html-${DOC_PV}.zip -d html || die + fi +} + +pc_incdir() { + $(tc-getPKG_CONFIG) --cflags-only-I $@ | \ + sed -e 's/^-I//' -e 's/[ ]*-I/:/g' -e 's/[ ]*$//' -e 's|^:||' +} + +pc_libdir() { + $(tc-getPKG_CONFIG) --libs-only-L $@ | \ + sed -e 's/^-L//' -e 's/[ ]*-L/:/g' -e 's/[ ]*$//' -e 's|^:||' +} + +pc_libs() { + $(tc-getPKG_CONFIG) --libs-only-l $@ | \ + sed -e 's/[ ]-l*\(pthread\|m\)\([ ]\|$\)//g' \ + -e 's/^-l//' -e 's/[ ]*-l/,/g' -e 's/[ ]*$//' \ + | tr ',' '\n' | sort -u | tr '\n' ',' | sed -e 's|,$||' +} + +python_prepare_all() { + if use lapack; then + append-ldflags "$($(tc-getPKG_CONFIG) --libs-only-other cblas lapack)" + local libdir="${EPREFIX}"/usr/$(get_libdir) + # make sure _dotblas.so gets built + sed -i -e '/NO_ATLAS_INFO/,+1d' numpy/core/setup.py || die + cat >> site.cfg <<-EOF + [blas] + include_dirs = $(pc_incdir cblas) + library_dirs = $(pc_libdir cblas blas):${libdir} + blas_libs = $(pc_libs cblas blas) + [lapack] + library_dirs = $(pc_libdir lapack):${libdir} + lapack_libs = $(pc_libs lapack) + EOF + else + export {ATLAS,PTATLAS,BLAS,LAPACK,MKL}=None + fi + + export CC="$(tc-getCC) ${CFLAGS}" + + append-flags -fno-strict-aliasing + + # See progress in http://projects.scipy.org/scipy/numpy/ticket/573 + # with the subtle difference that we don't want to break Darwin where + # -shared is not a valid linker argument + if [[ ${CHOST} != *-darwin* ]]; then + append-ldflags -shared + fi + + # only one fortran to link with: + # linking with cblas and lapack library will force + # autodetecting and linking to all available fortran compilers + append-fflags -fPIC + if use lapack; then + NUMPY_FCONFIG="config_fc --noopt --noarch" + # workaround bug 335908 + [[ $(tc-getFC) == *gfortran* ]] && NUMPY_FCONFIG+=" --fcompiler=gnu95" + fi + + # don't version f2py, we will handle it. + sed -i -e '/f2py_exe/s:+os\.path.*$::' numpy/f2py/setup.py || die + + distutils-r1_python_prepare_all +} + +python_compile() { + distutils-r1_python_compile ${NUMPY_FCONFIG} +} + +python_test() { + distutils_install_for_testing ${NUMPY_FCONFIG} + + cd "${TMPDIR}" || die + ${EPYTHON} -c " +import numpy, sys +r = numpy.test(label='full', verbose=3) +sys.exit(0 if r.wasSuccessful() else 1)" || die "Tests fail with ${EPYTHON}" +} + +python_install() { + distutils-r1_python_install ${NUMPY_FCONFIG} +} + +python_install_all() { + distutils-r1_python_install_all + + dodoc COMPATIBILITY DEV_README.txt THANKS.txt + + if use doc; then + dohtml -r "${WORKDIR}"/html/* + dodoc "${DISTDIR}"/${PN}-{user,ref}-${DOC_PV}.pdf + fi + + docinto f2py + dodoc numpy/f2py/docs/*.txt + doman numpy/f2py/f2py.1 +} diff --git a/dev-python/numpy/numpy-1.9.2.ebuild b/dev-python/numpy/numpy-1.9.2.ebuild new file mode 100644 index 000000000000..6e96869e38a8 --- /dev/null +++ b/dev-python/numpy/numpy-1.9.2.ebuild @@ -0,0 +1,146 @@ +# Copyright 1999-2018 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 + +EAPI=5 + +PYTHON_COMPAT=( python2_7 python3_{4,5,6} ) +PYTHON_REQ_USE="threads(+)" + +FORTRAN_NEEDED=lapack + +inherit distutils-r1 eutils flag-o-matic fortran-2 multilib toolchain-funcs versionator + +DOC_PV="1.9.1" +DOC_P="${PN}-${DOC_PV}" + +DESCRIPTION="Fast array and numerical python library" +HOMEPAGE="https://www.numpy.org" +SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz + doc? ( + http://docs.scipy.org/doc/${DOC_P}/${PN}-html-${DOC_PV}.zip + http://docs.scipy.org/doc/${DOC_P}/${PN}-ref-${DOC_PV}.pdf + http://docs.scipy.org/doc/${DOC_P}/${PN}-user-${DOC_PV}.pdf + )" +# It appears the docs haven't been upgraded, still @ 1.8.1 +LICENSE="BSD" +SLOT="0" +KEYWORDS="alpha amd64 arm arm64 hppa ia64 ~mips ppc ppc64 ~s390 ~sh sparc x86 ~amd64-fbsd ~x86-fbsd ~amd64-linux ~arm-linux ~x86-linux ~ppc-macos ~x64-macos ~x86-macos ~sparc-solaris ~x64-solaris ~x86-solaris" +IUSE="doc lapack test" + +RDEPEND="dev-python/setuptools[${PYTHON_USEDEP}] + lapack? ( virtual/cblas virtual/lapack )" +DEPEND="${RDEPEND} + doc? ( app-arch/unzip ) + lapack? ( virtual/pkgconfig ) + test? ( dev-python/nose[${PYTHON_USEDEP}] )" + +# Uses distutils.command.config. +DISTUTILS_IN_SOURCE_BUILD=1 + +PATCHES=( + "${FILESDIR}"/${P}-no-hardcode-blas.patch +) + +src_unpack() { + default + if use doc; then + unzip -qo "${DISTDIR}"/${PN}-html-${DOC_PV}.zip -d html || die + fi +} + +pc_incdir() { + $(tc-getPKG_CONFIG) --cflags-only-I $@ | \ + sed -e 's/^-I//' -e 's/[ ]*-I/:/g' -e 's/[ ]*$//' -e 's|^:||' +} + +pc_libdir() { + $(tc-getPKG_CONFIG) --libs-only-L $@ | \ + sed -e 's/^-L//' -e 's/[ ]*-L/:/g' -e 's/[ ]*$//' -e 's|^:||' +} + +pc_libs() { + $(tc-getPKG_CONFIG) --libs-only-l $@ | \ + sed -e 's/[ ]-l*\(pthread\|m\)\([ ]\|$\)//g' \ + -e 's/^-l//' -e 's/[ ]*-l/,/g' -e 's/[ ]*$//' \ + | tr ',' '\n' | sort -u | tr '\n' ',' | sed -e 's|,$||' +} + +python_prepare_all() { + if use lapack; then + append-ldflags "$($(tc-getPKG_CONFIG) --libs-only-other cblas lapack)" + local libdir="${EPREFIX}"/usr/$(get_libdir) + # make sure _dotblas.so gets built + sed -i -e '/NO_ATLAS_INFO/,+1d' numpy/core/setup.py || die + cat >> site.cfg <<-EOF + [blas] + include_dirs = $(pc_incdir cblas) + library_dirs = $(pc_libdir cblas blas):${libdir} + blas_libs = $(pc_libs cblas blas) + [lapack] + library_dirs = $(pc_libdir lapack):${libdir} + lapack_libs = $(pc_libs lapack) + EOF + else + export {ATLAS,PTATLAS,BLAS,LAPACK,MKL}=None + fi + + export CC="$(tc-getCC) ${CFLAGS}" + + append-flags -fno-strict-aliasing + + # See progress in http://projects.scipy.org/scipy/numpy/ticket/573 + # with the subtle difference that we don't want to break Darwin where + # -shared is not a valid linker argument + if [[ ${CHOST} != *-darwin* ]]; then + append-ldflags -shared + fi + + # only one fortran to link with: + # linking with cblas and lapack library will force + # autodetecting and linking to all available fortran compilers + append-fflags -fPIC + if use lapack; then + NUMPY_FCONFIG="config_fc --noopt --noarch" + # workaround bug 335908 + [[ $(tc-getFC) == *gfortran* ]] && NUMPY_FCONFIG+=" --fcompiler=gnu95" + fi + + # don't version f2py, we will handle it. + sed -i -e '/f2py_exe/s:+os\.path.*$::' numpy/f2py/setup.py || die + + distutils-r1_python_prepare_all +} + +python_compile() { + distutils-r1_python_compile ${NUMPY_FCONFIG} +} + +python_test() { + distutils_install_for_testing ${NUMPY_FCONFIG} + + cd "${TMPDIR}" || die + ${EPYTHON} -c " +import numpy, sys +r = numpy.test(label='full', verbose=3) +sys.exit(0 if r.wasSuccessful() else 1)" || die "Tests fail with ${EPYTHON}" +} + +python_install() { + distutils-r1_python_install ${NUMPY_FCONFIG} +} + +python_install_all() { + distutils-r1_python_install_all + + dodoc COMPATIBILITY DEV_README.txt THANKS.txt + + if use doc; then + dohtml -r "${WORKDIR}"/html/* + dodoc "${DISTDIR}"/${PN}-{user,ref}-${DOC_PV}.pdf + fi + + # absent in 1.9 + #docinto f2py + #dodoc numpy/f2py/docs/*.txt + #doman numpy/f2py/f2py.1 +} diff --git a/dev-python/numpy/numpy-9999.ebuild b/dev-python/numpy/numpy-9999.ebuild new file mode 100644 index 000000000000..a930c5a32ab4 --- /dev/null +++ b/dev-python/numpy/numpy-9999.ebuild @@ -0,0 +1,132 @@ +# Copyright 1999-2018 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 + +EAPI=5 + +PYTHON_COMPAT=( python2_7 python3_{4,5,6} ) +PYTHON_REQ_USE="threads(+)" + +FORTRAN_NEEDED=lapack + +inherit distutils-r1 eutils flag-o-matic fortran-2 git-r3 multilib multiprocessing toolchain-funcs versionator + +DOC_PV="1.9.1" +DOC_P="${PN}-${DOC_PV}" + +DESCRIPTION="Fast array and numerical python library" +HOMEPAGE="https://www.numpy.org" +SRC_URI="" +EGIT_REPO_URI="https://github.com/numpy/numpy.git" + +LICENSE="BSD" +SLOT="0" +KEYWORDS="" +IUSE="lapack test" + +RDEPEND=" + dev-python/setuptools[${PYTHON_USEDEP}] + lapack? ( virtual/cblas virtual/lapack )" +DEPEND="${RDEPEND} + lapack? ( virtual/pkgconfig ) + test? ( >=dev-python/nose-1.0[${PYTHON_USEDEP}] )" + +# Uses distutils.command.config. +DISTUTILS_IN_SOURCE_BUILD=1 + +PATCHES=( + "${FILESDIR}"/${PN}-1.9.2-no-hardcode-blas.patch +) + +pc_incdir() { + $(tc-getPKG_CONFIG) --cflags-only-I $@ | \ + sed -e 's/^-I//' -e 's/[ ]*-I/:/g' -e 's/[ ]*$//' -e 's|^:||' +} + +pc_libdir() { + $(tc-getPKG_CONFIG) --libs-only-L $@ | \ + sed -e 's/^-L//' -e 's/[ ]*-L/:/g' -e 's/[ ]*$//' -e 's|^:||' +} + +pc_libs() { + $(tc-getPKG_CONFIG) --libs-only-l $@ | \ + sed -e 's/[ ]-l*\(pthread\|m\)\([ ]\|$\)//g' \ + -e 's/^-l//' -e 's/[ ]*-l/,/g' -e 's/[ ]*$//' \ + | tr ',' '\n' | sort -u | tr '\n' ',' | sed -e 's|,$||' +} + +python_prepare_all() { + if use lapack; then + append-ldflags "$($(tc-getPKG_CONFIG) --libs-only-other cblas lapack)" + local libdir="${EPREFIX}"/usr/$(get_libdir) + cat >> site.cfg <<-EOF + [blas] + include_dirs = $(pc_incdir cblas) + library_dirs = $(pc_libdir cblas blas):${libdir} + blas_libs = $(pc_libs cblas blas) + [lapack] + library_dirs = $(pc_libdir lapack):${libdir} + lapack_libs = $(pc_libs lapack) + EOF + else + export {ATLAS,PTATLAS,BLAS,LAPACK,MKL}=None + fi + + export CC="$(tc-getCC) ${CFLAGS}" + + append-flags -fno-strict-aliasing + + # See progress in http://projects.scipy.org/scipy/numpy/ticket/573 + # with the subtle difference that we don't want to break Darwin where + # -shared is not a valid linker argument + if [[ ${CHOST} != *-darwin* ]]; then + append-ldflags -shared + fi + + # only one fortran to link with: + # linking with cblas and lapack library will force + # autodetecting and linking to all available fortran compilers + append-fflags -fPIC + if use lapack; then + NUMPY_FCONFIG="config_fc --noopt --noarch" + # workaround bug 335908 + [[ $(tc-getFC) == *gfortran* ]] && NUMPY_FCONFIG+=" --fcompiler=gnu95" + fi + + # don't version f2py, we will handle it. + sed -i -e '/f2py_exe/s: + os\.path.*$::' numpy/f2py/setup.py || die + + # we don't have f2py-3.3 +# sed \ +# -e 's:test_f2py:_&:g' \ +# -i numpy/tests/test_scripts.py || die + + distutils-r1_python_prepare_all +} + +python_compile() { + distutils-r1_python_compile -j $(makeopts_jobs) ${NUMPY_FCONFIG} +} + +python_test() { + distutils_install_for_testing ${NUMPY_FCONFIG} + + cd "${TMPDIR}" || die + ${EPYTHON} -c " +import numpy, sys +r = numpy.test(label='full', verbose=3) +sys.exit(0 if r.wasSuccessful() else 1)" || die "Tests fail with ${EPYTHON}" +} + +python_install() { + distutils-r1_python_install ${NUMPY_FCONFIG} +} + +python_install_all() { + DOCS+=( COMPATIBILITY DEV_README.txt THANKS.txt ) + + distutils-r1_python_install_all + + docinto f2py + dodoc doc/f2py/*.txt + doman doc/f2py/f2py.1 +} -- cgit v1.2.3