diff options
| author | V3n3RiX <venerix@redcorelinux.org> | 2017-11-16 16:56:41 +0000 |
|---|---|---|
| committer | V3n3RiX <venerix@redcorelinux.org> | 2017-11-16 16:56:41 +0000 |
| commit | 38f60b3ec9ff175535d9a056a76ae42931e61e21 (patch) | |
| tree | 320bc3a66bb967560bbfe8c576a6e75333cf83cc /sci-biology/kallisto | |
| parent | e2d84e38284aeb9d522a7e935554340ddf0e4a6f (diff) | |
gentoo resync : 16.11.2017
Diffstat (limited to 'sci-biology/kallisto')
| -rw-r--r-- | sci-biology/kallisto/Manifest | 4 | ||||
| -rw-r--r-- | sci-biology/kallisto/kallisto-0.43.1.ebuild | 25 | ||||
| -rw-r--r-- | sci-biology/kallisto/kallisto-9999.ebuild | 25 | ||||
| -rw-r--r-- | sci-biology/kallisto/metadata.xml | 19 |
4 files changed, 73 insertions, 0 deletions
diff --git a/sci-biology/kallisto/Manifest b/sci-biology/kallisto/Manifest new file mode 100644 index 000000000000..5ed38ff9ece7 --- /dev/null +++ b/sci-biology/kallisto/Manifest @@ -0,0 +1,4 @@ +DIST kallisto-0.43.1.tar.gz 1067076 SHA256 2164938c2c61c04e338c4c132cf749f56d39e6f0b4c517121bca1fbc218e430e SHA512 c7725a2d649cf96fcd24a20d542b409777cfd9fe97c09f0f459a5ec2981e0a4f5f0ea03d76d3ec3edf0e498c799fc7d074d442d5e35ddb4043d1f7634619dda8 WHIRLPOOL a0f8c2cab5afa3df7cf7f540319d32a99d698ac50e4574c941972fff789e9d8e258124153d16a777180595b201d91e240e5ffd17994cc2571e71f6fcb47fdeee +EBUILD kallisto-0.43.1.ebuild 573 SHA256 06b09d70b72ee00819c1185d503d3b3e0a5c8f60afa22594554c618153ecf709 SHA512 bb8667422d4015ca7a3aad912385b5322b83c1122a99f79893f527c886cbc05049f2e37f7cc85d2c789994ebd477b9ff60019e4c91b7b95f65a51dd7343c4aff WHIRLPOOL 26e198e8a369eeff6da2da14366bac57c26ea248559afae434a63be3003178a611ce823d5fa695974c6dd6878fd0d8fb8564035243add21e9c7295ec6fd191f7 +EBUILD kallisto-9999.ebuild 573 SHA256 06b09d70b72ee00819c1185d503d3b3e0a5c8f60afa22594554c618153ecf709 SHA512 bb8667422d4015ca7a3aad912385b5322b83c1122a99f79893f527c886cbc05049f2e37f7cc85d2c789994ebd477b9ff60019e4c91b7b95f65a51dd7343c4aff WHIRLPOOL 26e198e8a369eeff6da2da14366bac57c26ea248559afae434a63be3003178a611ce823d5fa695974c6dd6878fd0d8fb8564035243add21e9c7295ec6fd191f7 +MISC metadata.xml 574 SHA256 ea8f0878ecc78b897b0dda2d342df7062ecff912790cb0c407929526e6313b3d SHA512 322d73b8e377ce74593d5c79a4e2f2041ab9313d8d5f59866e148ccda89892fd4fe56a7f0c8d12458f97de52efc4e933044788ad24fd99ffd4fb81dbbc2b2bcc WHIRLPOOL 93e91e065cfc28afe65738fb66928bbd938fcf168543cd75f0a724074e0c5e42afcbd51ab79f824344f7055caedc5bb4c43b0a29a6740056455f029752dd6af1 diff --git a/sci-biology/kallisto/kallisto-0.43.1.ebuild b/sci-biology/kallisto/kallisto-0.43.1.ebuild new file mode 100644 index 000000000000..0020e891a032 --- /dev/null +++ b/sci-biology/kallisto/kallisto-0.43.1.ebuild @@ -0,0 +1,25 @@ +# Copyright 1999-2017 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 + +EAPI=6 + +inherit cmake-utils + +DESCRIPTION="Near-optimal RNA-Seq quantification" +HOMEPAGE="http://pachterlab.github.io/kallisto/" + +if [[ ${PV} == *9999 ]]; then + inherit git-r3 + EGIT_REPO_URI="https://github.com/pachterlab/kallisto.git" +else + SRC_URI="https://github.com/pachterlab/${PN}/archive/v${PV}.tar.gz -> ${P}.tar.gz" + KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" +fi + +LICENSE="BSD" +SLOT="0" + +RDEPEND=" + sci-libs/hdf5:= + sys-libs/zlib:=" +DEPEND="${RDEPEND}" diff --git a/sci-biology/kallisto/kallisto-9999.ebuild b/sci-biology/kallisto/kallisto-9999.ebuild new file mode 100644 index 000000000000..0020e891a032 --- /dev/null +++ b/sci-biology/kallisto/kallisto-9999.ebuild @@ -0,0 +1,25 @@ +# Copyright 1999-2017 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 + +EAPI=6 + +inherit cmake-utils + +DESCRIPTION="Near-optimal RNA-Seq quantification" +HOMEPAGE="http://pachterlab.github.io/kallisto/" + +if [[ ${PV} == *9999 ]]; then + inherit git-r3 + EGIT_REPO_URI="https://github.com/pachterlab/kallisto.git" +else + SRC_URI="https://github.com/pachterlab/${PN}/archive/v${PV}.tar.gz -> ${P}.tar.gz" + KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" +fi + +LICENSE="BSD" +SLOT="0" + +RDEPEND=" + sci-libs/hdf5:= + sys-libs/zlib:=" +DEPEND="${RDEPEND}" diff --git a/sci-biology/kallisto/metadata.xml b/sci-biology/kallisto/metadata.xml new file mode 100644 index 000000000000..aba0d0ebf330 --- /dev/null +++ b/sci-biology/kallisto/metadata.xml @@ -0,0 +1,19 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> + <maintainer type="person"> + <email>mschu.dev@gmail.com</email> + <name>Michael Schubert</name> + </maintainer> + <maintainer type="project"> + <email>proxy-maint@gentoo.org</email> + <name>Proxy Maintainers</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">pachterlab/kallisto</remote-id> + </upstream> +</pkgmetadata> |